Ticket #176 (reopened defect)

Opened 10 years ago

Last modified 9 years ago

"Stack size is too small" error

Reported by: xuvtools Owned by: emmenlau
Priority: blocker Milestone: XuvTools-1.8.1-final
Component: xuvtools Version: 1.7.0
Keywords: Cc: palmada@…, developers@…

Description

Hello,

I have a panel of stacks with 4 channels and some z's. When I try to tell xuvtools to run sitcher, I get an error message "Stack x has been disabled because it's size is too small" for every stack until it crashes completely.

I'm able to load the files and generate thumbnails.

Is it a file type issue?

All the best, Pedro

Attachments

XuvLogs Download (12.4 KB) - added by xuvtools 10 years ago.
log
Bug0176-Settings1.png Download (142.3 KB) - added by emmenlau 9 years ago.
Settings 1
Bug0176-Settings2.png Download (66.4 KB) - added by emmenlau 9 years ago.
Settings 2

Change History

Changed 10 years ago by xuvtools

log

Changed 10 years ago by emmenlau

  • status changed from new to accepted

Hi,

Thanks for the good report! Your logfile indicates that the stacks would have a Z of only 1 plane. Do you have tiff-stacks, or planewise tiff images? If you are unsure, please send two stacks. If the files are too big for email (bigger than 10MB), please write back so I can send you an ftp account.

All the best,

Mario

Changed 10 years ago by emmenlau

  • cc palmada@… added

Adding Pedro to CC-list. Please check the previous comment!

Changed 9 years ago by emmenlau

  • milestone set to XuvTools-1.8.0-final

Changed 9 years ago by emmenlau

Settings 1

Changed 9 years ago by emmenlau

Settings 2

Changed 9 years ago by emmenlau

  • status changed from accepted to closed
  • resolution set to fixed

From the screenshots it seems your XuvTools version has a bug and sets the search window radius wrongly. It sets

16,16,4

but correct is

4,16,16

Please update to the newest available beta, and make sure that in "Advanced Parameters" you change the setting to

4,16,16

Changed 9 years ago by xuvtools

Nope, that didn't fix anything...

Changed 9 years ago by emmenlau

  • status changed from closed to reopened
  • resolution fixed deleted
  • milestone changed from XuvTools-1.8.0-final to XuvTools-1.8.1-final
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